About

Network Benchmarking

netbenchmark is an open-source R/Bioconductor package that implements a broad benchmarking of unsupervised network inference methods from data. It is focused on, but not limited to,  gene networks.

The package was written by Pau Bellot, Catharina Olsen and Patrick E. Meyer (in the BioSys Group of the Université de Liège in collaboration with the GPI group of Universitat Politècnica de Catalunya).

netbenchmark is maintained by Pau Bellot and licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International.

Installation

To install this package, start R development and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("netbenchmark")

Documentation

To view documentation for the 
version of this package installed in your system, start R and enter:
browseVignettes("netbenchmark")

News

The version 1.0 of the package has been recently accepted by Bioconductor and is currently included in the stable release of Bioconductor 3.1, here you can see its download status.

New Web!

https://imatge.upc.edu/netbenchmark/